Mus musculus Mus musculus Homo sapiens Homo ...

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Gammaproteobacteria. Betaproteobacteria. Deltaproteobacteria. 79 74. CLS_cap from bacteria. 8780. 89. Gammaproteobacteria. 88. 90. Deltaproteobacteria.
97 Mus musculus Mus musculus 99 Homo sapiens 80 Homo sapiens 91 Gallus gallus 96 Xenopus laevis 91 Animalia Danio rerio Ciona intestinalis 100 Hydra magnipapillata 98 Hydra magnipapillata Strongylocentrotus purpuratus Apis mellifera 63 Drosophila melanogaster 94 Drosophila melanogaster Drosophila melanogaster Caenorhabditis elegans 94 Caenorhabditis elegans Saccharomyces cerevisiae 98 Candida albicans Schizosaccharomyces pombe Fungi 94 77 Neurospora crassa 95 Aspergillus fumigatus Ustilago maydis 84 Cryptococcus neoformans var. neoformans J EC21 86 Monosiga brevicollis MX1 Choanoflagellate Thalassiosira pseudonana Bacillariophyta Ectocarpus siliculosus Phaeophyceae Saprolegnia parasitica 71 Pythium ultimum 98 Phytophthora ramorum 99 Oomycetes 93 Phytophthora infestans 99 88 Phytophthora sojae 100 Galdieria sulphuraria Galdieria sulphuraria Rhodophyta Cyanidioschyzon merolae 99 Ostreococcus lucimarinus 98 Ostreococcus tauri 83 Chlorophyta Micromonas sp. RCC299 54 Chlamydomonas reinhardtii 78 Physcomitrella patens subsp. patens Oryza sativa 91 Planta Arabidopsis thaliana 94 Populus trichocarpa 89 90 Ricinus communis Granulibacter bethesdensis 97 Azospirillum sp. B510 Chelativorans sp. BNC1 97 98 85 Hoeflea phototrophica DFL-43 Aurantimonas manganoxydans 88 Hyphomicrobium denitrificans Bradyrhizobium sp. ORS278 82 Oligotropha carboxidovorans OM5 99 93 Rhodopseudomonas palustris Acidithiobacillus ferrooxidans gamma 94 Thiobacillus denitrificans 92 Geobacter metallireducens Azotobacter vinelandii DJ Methylococcus capsulatus 79 74 Bermanella marisrubri 91 Marinobacter sp. ELB17 80 87 Nitrosococcus oceani Rickettsiella grylli 89 Legionella longbeachae 85 Legionella pneumophila 100 Legionella pneumophila 2300/99 Alcoy 97 Legionella pneumophila str. Corby Pelobacter carbinolicus 88 Syntrophus aciditrophicus Candidatus Solibacter usitatus Ellin6076 90 Acidobacterium capsulatum 54 53 Sulfurihydrogenibium sp. YO3AOP1 90 Sulfurihydrogenibium azorense Az-Fu1 99 Hydrogenivirga sp. 128-5-R1-1 91 Persephonella marina EX-H1 84 Thermodesulfovibrio yellowstonii Leptospirillum ferrodiazotrophum 98 Methylacidiphilum infernorum Xylanimonas cellulosilytica 97 Xylanimonas cellulosilytica Bifidobacterium angulatum 97 90 Gardnerella vaginalis Leifsonia xyli 97 Collinsella intestinalis Propionibacterium acnes 93 87 Thermobifida fusca YX Streptomyces sp. SPB74 61 96 Catenulispora acidiphila DSM 44928 Saccharopolyspora erythraea 88 Corynebacterium kroppenstedtii DSM 44385 93 Rhodococcus erythropolis 98

Opisthokonta

Clade E

CLS_cap from eukaryotes

Stramenopiles

Archaeplastida

Alpha proteobacteria

Gammaproteobacteria Betaproteobacteria Deltaproteobacteria

CLS_cap from bacteria Gammaproteobacteria

Deltaproteobacteria Acidobacteria Aquificae Nitrospirae Verrucomicrobia

Actinobacteria

Bacterial PGPS

0.5