RhoA GTPase Is Dispensable for Actomyosin ...

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Feb 11, 2011 - RhoB and RhoC GTPases in actomyosin regulation. RhoA is a founding member of the mammalian Rho GTPase family and has been ...

THE JOURNAL OF BIOLOGICAL CHEMISTRY VOL. 286, NO. 17, pp. 15132–15137, April 29, 2011 © 2011 by The American Society for Biochemistry and Molecular Biology, Inc. Printed in the U.S.A.

RhoA GTPase Is Dispensable for Actomyosin Regulation but Is Essential for Mitosis in Primary Mouse Embryonic Fibroblasts*□ S

Received for publication, February 11, 2011, and in revised form, March 3, 2011 Published, JBC Papers in Press, March 14, 2011, DOI 10.1074/jbc.C111.229336

Jaime Melendez‡, Kristy Stengel‡, Xuan Zhou‡, Bharesh K. Chauhan§, Marcella Debidda‡, Paul Andreassen‡, Richard A. Lang§, and Yi Zheng‡1 From the Divisions of ‡Experimental Hematology and Cancer Biology and §Developmental Biology, Children’s Hospital Research Foundation, University of Cincinnati, Cincinnati, Ohio 45229

RhoA is a founding member of the mammalian Rho GTPase family and has been implicated in a variety of roles in cell regulation, mostly by the dominant negative mutant expression approach or applying C3 bacterial toxin that covalently modifies the effector domain of RhoA and other related Rho GTPases (1–3). Among the widely accepted cell functions, RhoA is considered essential for actin stress fiber formation and actomyosin contractility, focal adhesion complex and adherens junction complex formation, gene transcription, cell cycle progression, and survival (1, 4, 5). Vertebrates have two closely related family members, RhoB and RhoC, that share significant sequence homology with RhoA (6). RhoB is localized primarily on endosome membranes, whereas RhoC, like RhoA, is cytosolic (7, 8). Addition-

* This work was supported, in whole or in part, by National Institutes of Health Grants R01 CA150547, R01 HL085362, and P30 DK090971 (to Y. Z.). The on-line version of this article (available at http://www.jbc.org) contains supplemental Experimental Procedures and Figs. S1–S10. 1 To whom correspondence should be addressed: Division of Experimental Hematology and Cancer Biology, Children’s Hospital Medical Center, 3333 Brunet Ave., Cincinnati, OH 45229. Tel.: 513-636-0595; Fax: 513-636-3768; E-mail: [email protected] □ S


ally, RhoB and RhoC appear to show different, and sometimes opposite, cell functions (8, 9). Neither RhoB nor RhoC knockout mice display detectable developmental defects, and no clear phenotypes were reported from primary cells derived from these gene-targeted animals (10 –12). In the present studies, we present genetic data to unambiguously demonstrate an essential role of RhoA in regulating cell cytokinesis and a dispensable, redundant role with RhoB and RhoC in regulating the actomyosin and adhesion machineries in primary mouse embryonic fibroblasts (MEFs).2

EXPERIMENTAL PROCEDURES Mice—Mice harboring conditional RhoA alleles, in which exon 3 is flanked by loxP sites (RhoAf/f), were generated as depicted in supplemental Fig. S1. Mouse Embryonic Fibroblast Isolation and Cell Culture— Primary MEFs were isolated from mouse embryos at embryonic day 12.5 as described previously (13). See supplemental Experimental Procedures for additional details. RESULTS AND DISCUSSION RhoA Is Dispensable for Actomyosin Signaling—Our current knowledge of the cellular functions of RhoA is based primarily on numerous studies performed in fibroblast or epithelial cells by nonspecific mutant overexpression or toxin treatment (13– 18). To investigate the physiologic role of RhoA in cell regulation, we generated a conditional knock-out mouse model in which exon 3 of the RhoA gene, which encodes the guanine nucleotide binding sequences, was sandwiched between loxP sequences to allow Cre recombinase-mediated gene targeting (supplemental Fig. S1). Primary MEFs were derived from homozygous embryos, and deletion of RhoA gene was achieved by infection of the cells with adenovirus transiently expressing Cre (Fig. 1A). Deletion of RhoA in MEFs did not affect the expression or activity of the Rho family members Rac1 or Cdc42 but resulted in a compensatory increase in the expression and activity of the more closely related RhoB and RhoC proteins (Fig. 1B). RhoA-null MEFs were morphologically normal but appeared to occupy a larger spreading area than control cells (Fig. 1C). Surprisingly, deletion of RhoA did not significantly reduce actin stress fibers (Fig. 1C) or focal adhesion com2

The abbreviations used are: MEF, mouse embryonic fibroblast; MLC, myosin light chain; 7-AAD, 7-aminoactinomycin D; FAK, focal adhesion kinase; ROCK, Rho-associated coiled-coil protein kinase; Pax, paxillin; p, phospho.

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RhoA, the founding member of mammalian Rho GTPase family, is thought to be essential for actomyosin regulation. To date, the physiologic function of RhoA in mammalian cell regulation has yet to be determined genetically. Here we have created RhoA conditional knock-out mice. Mouse embryonic fibroblasts deleted of RhoA showed no significant change in actin stress fiber or focal adhesion complex formation in response to serum or LPA, nor any detectable change in Rho-kinase signaling activity. Concomitant knock-out or knockdown of RhoB and RhoC in the RhoAⴚ/ⴚ cells resulted in a loss of actin stress fiber and focal adhesion similar to that of C3 toxin treatment. Proliferation of RhoAⴚ/ⴚ cells was impaired due to a complete cell cycle block during mitosis, an effect that is associated with defective cytokinesis and chromosome segregation and can be readily rescued by exogenous expression of RhoA. Furthermore, RhoA deletion did not affect the transcriptional activity of Stat3, NF␬B, or serum response factor, nor the expression of the cell division kinase inhibitor p21Cip1 or p27Kip1. These genetic results demonstrate that in primary mouse embryonic fibroblasts, RhoA is uniquely required for cell mitosis but is redundant with related RhoB and RhoC GTPases in actomyosin regulation.

Cellular Function of RhoA

plex formation (Fig. 1, D and E) under serum or lysophosphatidic acid stimulation. In fact, immunostaining of vinculin revealed that the focal adhesion complex in the RhoA-null cells appeared to be enhanced, rather than reduced, as compared with that in WT cells. However, RhoA-deficient cells did exhibit increased cell spreading area with a multinucleus phenotype (Fig. 1C and supplemental Fig. S2). Additionally, PDGFstimulated lamellipodia or bradykinin-stimulated filopodia formation was not affected by RhoA deletion (data not shown). Consistent with the lack of effects on actin stress fibers, RhoAnull cells did not show a significant change in Rho-kinase activity (Fig. 1F). Furthermore, the phosphorylation status of two signaling components of the previously implicated actomyosin machinery regulated by RhoA, myosin light chain (MLC) and cofilin (5, 14), was not affected by RhoA knock-out, but phospho-Pak1 levels appeared reduced (Fig. 1F). When cells were treated with C3 toxin, stress fiber formation was eliminated in both WT and RhoA-null cells, but the RhoA-null cells appeared APRIL 29, 2011 • VOLUME 286 • NUMBER 17

to remain responsive to the FBS stimulation in producing lamellipodia-like structures (supplemental Fig. S2). These results demonstrate unambiguously that RhoA is dispensable for previously attributed functions of actin stress fiber and focal adhesion formation and is not required for Rho-kinase and downstream actomyosin signaling. The results also raise the possibility that previously defined cell functions of RhoA may be attributable to other related Rho GTPases or that multiple RhoA-related GTPases share redundancy. RhoA Is Required for MEF Cell Proliferation during Mitosis— In addition to actomyosin signaling, RhoA has been implicated in the regulation of essential gene transcription activities involved in cell growth (19, 20). Reporter assays were carried out to determine whether RhoA deletion alters the transcriptional activity of NF␬B, SRF, and STAT3, all of which have been proposed to be regulated by RhoA-mediated activation (21– 24). We have found that RhoA-null cells activate these transcription factors similarly to WT cells following serum stimuJOURNAL OF BIOLOGICAL CHEMISTRY


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FIGURE 1. RhoA is dispensable for actin stress fiber and focal adhesion formation in MEFs. A, deletion of RhoA in loxp/loxp MEF cells using Cre-expressing adenovirus. Cells were infected with adeno-Cre or ␤-Gal virus. Cells were infected twice, and the levels of RhoA protein were evaluated by Western blotting. GA3PDH, glyceraldehyde 3-phosphate dehydrogenase. B, RhoA deletion affected expression and activity of RhoC and RhoB but not Cdc42 or Rac1 GTPases. GST-PAK1 pZ1-binding domain and GST-rhotekin Rho-binding domain were used for pulldown experiments to evaluate the respective GTPase activities 48 h after virus infection. C, actin stress formation was detected by rhodamine-phalloidin staining of the cells. Control and RhoA KO cells were compared with C3 toxin-treated WT cells (2 ␮g/ml for 4 h) in the F-actin network. D, focal adhesion complex proteins were examined by immunofluorescence in control and RhoA-deficient MEF cells. Cells were plated and fixed, and focal adhesion proteins were revealed using specific antibodies for p-Pax(118) (40⫻) or vinculin (63⫻) (in green). Cells were co-stained with rhodamine-phalloidin for F-actin (in red). E, Western blots for focal adhesion proteins in control and RhoA-deficient cells. F, effects of RhoA KO in MEF cells on ROCK and ROCK-mediated actomyosin activity. Cells were plated for 48 –72 h before being processed for Western blotting with p-MLC and p-cofilin specific antibodies. For measuring ROCKII activity, ROCKII was immunoprecipitated with an anti-ROCKII antibody followed by an in vitro kinase activity assay using MYPT-1 polypeptide as a substrate.

Cellular Function of RhoA

lation (supplemental Fig. S3), indicating that RhoA is also dispensable for the transcription activities of these important cell proliferation proteins. In the case of SRF activation, it was previously shown that RhoA-mediated Rho-kinase activity and actin bundling regulate the nuclear translocation of the SRF co-factor, MAL (25, 26). In light of our finding that RhoA is not required for actin stress fiber formation and SRF transcription regulation, we conclude that such a RhoA/Rho-kinase/F-actin/ MAL/SRF pathway is not functionally essential for the transcription regulation. RhoA has been found to be a central player in cytokinesis by regulating cortical contractility and cleavage furrow formation and is considered essential for G1/S phase transition during


proliferation (27, 28). We next examined whether RhoA-null cells showed any defects in proliferation under normal culture conditions. Control cells proliferated exponentially in a 4-day proliferation assay, whereas RhoA-null cells stopped proliferating after 24 h in culture (Fig. 2A). To better understand this effect on proliferation, we conducted cell cycle analysis following staining with 7-AAD. The resulting data revealed an accumulation of RhoA-deficient cells in G2/M (4N DNA content) as compared with controls (Fig. 2B). Additionally, MPM-2 immunostaining, which shows mitotic cells (29), demonstrated a strong reduction of the frequency of RhoA-null cells in mitosis at 48 h in culture as compared with controls (supplemental Fig. S4). Combined, these results indicate that loss of RhoA results VOLUME 286 • NUMBER 17 • APRIL 29, 2011

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FIGURE 2. RhoA-deficient cells are impaired in proliferation due to a mitotic defect during cytokinesis. A, proliferation assays of control cells (Loxp-Gal, WT-Gal, and WT-Cre) and RhoA-deficient cells (Loxp-Cre) were carried out at a density of 1 ⫻ 105 cells/well. Cells were counted every 24 h. Cell viability was estimated by using trypan blue staining. Assays were performed in triplicate. Error bars represent S.D. B, representative cell cycle profile of RhoA-deficient cells 48 h in culture. Cells were plated at a density of 1 ⫻ 105 cells/well, fixed, and analyzed by flow cytometry following propidium iodide/7-AAD staining. Error bars represent S.D. C, nuclear morphology in RhoA-deficient cells. Control and RhoA-deficient cells were plated for 24 –96 h. Cells were stained with DAPI. The percentages of cells with different nuclear phenotypes at 72 h of culture were quantified. Error bars represent S.D. D, evidence of DNA bridges between nuclei in RhoA-deficient cells. Cells were stained with DAPI to reveal nuclear morphology and were co-stained with rhodamine-phalloidin for F-actin. Arrowheads indicate DNA-bridges. E, ␣/␤- and ␥-tubulin immunostaining in RhoA-deficient cells. Cells were plated for 48 h, fixed, and incubated with antibodies for ␣/␤-tubulin (green) and ␥-tubulin (red). ␥-Tubulin staining was used to determine centrosome duplication. Nuclei staining was revealed with DAPI. F, evaluation of cell cycle markers in RhoA-deficient cells. Plated cells were extracted at 72 h of culture, and Western blots were conducted for p-histone H3, cyclin D1, cyclin B1, cyclin E, cyclin A, and p-ERK2 as markers for cell cycle progression. GA3PDH, glyceraldehyde 3-phosphate dehydrogenase.

Cellular Function of RhoA

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assemble the contractile ring and mediate cleavage furrow ingression and subsequent abscission (39 – 44). Because deletion of RhoA strongly inhibited mitosis in our experiments, we were unable to directly observe the formation of furrowing or abscission, recruitment of ECT-2, anillin, or mDia1, or activation of Aurora B in the knock-out cells (data not shown). Our results show that genetic deletion of RhoA causes binucleated and fragmented nuclei in the absence of cytokinesis. In HeLa cells, siRNA-mediated depletion of citron kinase also resulted in the formation of multinucleated cells (36). However, a mild defect in cytokinesis was observed in citron kinase knock-out mice, suggesting its redundancy with other Rho effectors responsible for filament contraction (45). Similarly, depleting mDia2 in NIH3T3 cells also increased the number of binucleated cells (46). In the same context, Rosario et al. (47) recently demonstrated that Plk4⫹/⫺ MEF, the Polo family kinase, which is required for late mitotic progression, showed a high incidence of multinucleation, supernumerary centrosomes, and a near tetraploid karyotype. In addition to the binucleation phenotype associated with a cleavage failure, RhoA-null MEFs displayed micronucleation. This further suggests that RhoA is involved in chromosome segregation. In the future, it will be interesting to dissect this novel function for RhoA during mitosis. RhoA, RhoB, and RhoC Are Redundantly Involved in Actomyosin Regulation in MEFs—To more rigorously test the possibility that RhoA is essential for cell proliferation, an add-back rescue experiment was performed. RhoAflox/flox cells were infected with retrovirus expressing RhoA-GFP (Fig. 3A). Subsequently, endogenous RhoA was deleted by using an adenoCre virus. Proliferation assays demonstrate that expression of exogenous wild-type RhoA is sufficient to rescue and support normal proliferation in the endogenous RhoA gene deleted cells (Fig. 3B). Thus, RhoA is required for normal cell cycle progression. Consistently, reintroduction of wild-type RhoA significantly reduced the percentage of cells containing binucleated or micronucleated nuclei as compared with controls (data not shown). Also consistent with a dispensable role in actomyosin regulation, exogenous expression of RhoA-GFP in MEF cells in the absence of endogenous RhoA did not affect the actin network or the expression and distribution of focal adhesion proteins (data not shown). Initial characterization of RhoA-deficient cells showed an increase in both RhoC protein and its activity (Fig. 1A). RhoC⫺/⫺ MEFs behaved similarly to wild-type cells in actin reorganization, focal adhesion complex formation and proliferation (Fig. 3D and supplemental Fig. S10), indicating that RhoC plays a redundant role in these cell functions. To determine the contribution of RhoC in RhoA-deficient cells, RhoAflox/flox mice that were heterozygous for RhoC knock-out were crossed to generate RhoA/RhoC-deficient MEF cells. In the absence of RhoA and RhoC, RhoB protein level and activity were increased (Fig. 3C). Surprisingly, RhoA/RhoC-deficient cells displayed completely normal actin filaments and focal adhesions (Fig. 3D). Further, there were no abnormalities in the actomyosin signaling of p-MLC and p-cofilin in RhoA⫺/⫺/RhoC⫺/⫺ cells as compared with WT cells or cells deficient for only RhoA (supplemental Fig. S9). These data indicate that RhoC itself is not JOURNAL OF BIOLOGICAL CHEMISTRY


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in a cell cycle arrest. This conclusion is further supported by the finding that RhoA-null cells displayed a significant decrease in BrdU incorporation as compared with control (supplemental Fig. S5). The impaired proliferation in these cells was not associated with an induction of apoptosis, as determined by TUNEL and DNA laddering assays, or an induction of senescence, as determined by ␤-Gal staining and the expression of p16 (supplemental Fig. S6). Additionally, no changes in the expression of the cell cycle inhibitors, p21Cip1 and p27Kip1, were observed (supplemental Fig. S6). The nuclei of RhoA-null cells showed two predominant patterns, binucleated and micronucleated (Fig. 2C). These phenotypes were further observed by lamin B staining for the nuclear envelope (supplemental Fig. S7). The frequency of these phenotypes in the knock-out cells plateaued at 72 h in culture and was significantly different from that of control cells (Fig. 2C). 7-AAD staining also revealed increased DNA content in RhoAnull populations, consistent with an aneuploid state (Fig. 2B). This raises the possibility that at least a subset of cells with 4N DNA content is in tetraploid G1, rather than diploid G2. Several studies have documented arrest of cells in tetraploid G1 after cytokinesis failure (29 –32). Interestingly, the levels of phospho-cyclin B1 and phospho-histone H3, markers for G2/M phase, as well as phospho-ERK, were drastically lower in RhoAnull cells than in controls, and the level of the G1/S marker, cyclin D1, was higher (Fig. 2F). This further supports the conclusion that RhoA-null cells were arrested in a tetraploid G1 state. Although no RhoA-null cells were observed in mitosis, consistent with an interphase arrest, no significant changes in the interphase microtubule pattern, as detected with an antibody against ␣-␤ tubulin, were observed, however minor abnormalities were visible in the KO cells (supplemental Fig. S8). Furthermore, although supernumerary centrosomes can cause cytokinetic failure, RhoA deletion did not impact centrosome duplication in these cells, as demonstrated by ␥-tubulin staining (Fig. 2E). The presence of high levels of micronucleation and binucleation suggests that RhoA-null cells were defective for chromosome segregation and cytokinesis, respectively. The possibility of a segregation defect is further supported by the finding of chromosome bridges in interphase RhoA-null cells, which presumably returned to interphase following incomplete segregation during mitosis (Fig. 2D). Previous work has demonstrated that chromosome bridges can induce failure of cytokinesis and thereby result in tetraploidization (30, 32). Cytokinesis of mammalian cells is initiated by assembly of the contractile actomyosin ring at the equatorial cell cortex during anaphase(33). Using an RNAi-based approach, it has been shown that RhoA is essential for cytokinesis in Caenorhabditis elegans embryos (34). RhoA appears to be required for the assembly and ingression of the actomyosin filament ring (35). RhoA activation during initiation of furrowing depends on the Rho guanine nucleotide exchange factor protein Ect2. Ect2 is phosphorylated during mitosis by Cdk1 and the Polo-like kinase Plk1, and in turn, activates RhoA at the equatorial region and the cleavage furrow (36 –38). Activated RhoA recruits two effector kinases, citron kinase and Rho-kinase, along with other mediators such as diaphanous-related protein mDia1, to

Cellular Function of RhoA

sufficient for the redundant actomyosin regulatory role with RhoA. Population doubling experiments showed that RhoA/RhoCdeficient cells exhibited a partial increase in the rate of proliferation as compared with RhoA-deficient cells, an effect associated with a compensatory elevation of RhoB activity in the cells (supplemental Fig. S10). To evaluate the contribution of RhoB to the cellular phenotypes of these RhoA/RhoC double knock-out cells, siRNA specifically targeting RhoB was used to suppress the expression of the RhoB protein (Fig. 3E). The lack of RhoB expression in RhoA/RhoC double knock-out cells not


only significantly reduced the levels of p-cofilin and p-MLC, but also the phosphorylation of paxillin and FAK (Fig. 3F). In fact, cultured RhoA/RhoB/RhoC-deficient cells showed a complete deficiency in actin stress fiber formation and displayed signs of detachment (Fig. 3G). These phenotypes are similar to those observed in studies utilizing C3 toxin (Fig. 1C), which inhibits all three Rho subfamily members. Our study shows that RhoB, together with RhoC, functions as a redundant part of the regulatory signals in RhoA-mediated pathways and that these three subfamily members of Rho GTPase family collectively, rather than individually, control cell actomyosin machinery. VOLUME 286 • NUMBER 17 • APRIL 29, 2011

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FIGURE 3. RhoB and RhoC serve a redundant role with RhoA in regulating actomyosin activity. A, RhoAflox/flox and WT cells were infected with MIEG3-GFP (control vector) or MIEG3-RhoA-GFP retrovirus. The transduced cells were sorted and plated for 24 h, and adeno-Cre or ␤-Gal adenovirus infection was carried out. Western blots (WB) for endogenous RhoA or transduced RhoA/GFP were performed. GA3PDH, glyceraldehyde 3-phosphate dehydrogenase. B, a cell proliferation assay was performed in WT, RhoA deleted, or RhoA reconstituted cells. Cells grown in triplicate plates were quantified at the indicated times. Error bars represent S.D. C, RhoB and RhoC activities in relation to that of RhoA deletion. WT and RhoC KO cells were plated, and 24 h later, endogenous RhoA was deleted by adeno-Cre treatment. Cells were extracted for RhoA, RhoB, and RhoC activity measurements by GST-rhotekin pulldown. D, RhoA/RhoC-deficient cells do not show adhesion defects. WT and RhoC KO cells were stained for vinculin, p-FAK (green), and F-actin (red). Nuclei were stained with DAPI (blue). E, effect of RhoB suppression in RhoA/RhoC-deficient cells on F-actin and focal adhesion. WT and RhoC KOs were plated, and 24 h later, they were incubated with an on-TARGETplusR control non-targeting pool or an on-TARGETplus SMARTpool mouse RhoB. Endogenous RhoA were deleted by adenovirus treatment. Cells were processed for Western blotting to determine the levels of RhoA, RhoB, and RhoC proteins. F, effect of RhoB knockdown on focal adhesion proteins and actomyosin components in RhoA/RhoC-deficient cells. Cells were treated with rhoB-specific siRNA, and the levels of p-MLC, p-cofilin, p-FAK, and p-Pax were determined by Western blotting. G, effect of RhoB knockdown on F-actin structure and focal adhesion complex in RhoA/RhoC-deficient cells. Cells were stained for p-Pax, p-FAK (green), and F-actin (red).

Cellular Function of RhoA

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Conclusions—In the present studies, we have presented genetic data to unambiguously demonstrate an essential role of RhoA in regulating cell mitosis, but surprisingly, a dispensable, redundant role in regulating cell actomyosin machineries in MEFs. In particular, RhoA is not essential for actin stress fiber and focal adhesion formation in MEFs. Rather, these functions are redundant with closely related RhoC and RhoB GTPases. RhoA is essential for cell proliferation at the cytokinesis stage of cell cycle, and neither RhoB nor RhoC is required for this important function. RhoA is dispensable for regulation of NF␬B, Stat3, and SRF transcriptional activities, which were previously implicated in RhoA-mediated cell growth regulation. RhoA is also dispensable for cell survival and for tumor suppressor p21Cip1 and p27Kip1 regulation that was previously suggested to be involved in RhoA-mediated signaling during S phase transition (48 –50). Finally, our data indicate that RhoA is dispensable for signaling events of Rho-kinase, p-MLC/cofilin, JNK, ERK, and cyclin D1, which were implicated as RhoA-regulated events in numerous previous studies (14, 28). In the context of a recent observation that RhoA appears to be dispensable for skin development in mice (51), our studies raise the possibility that the general principles of RhoA function defined by in vitro biochemical methods in clonal cell lines may not necessarily apply to primary cells and that the physiological function and signaling pathways regulated by RhoA are tissue cell type-specific.

Supplemental Experimental Procedures Viral transduction. Conditional deletion of RhoA was achieved through two rounds of infection with low titer adenoviral Cre recombinase (Ad-Cre) with Ad-Gal virus serving as a control. Recombination of the RhoA locus was monitored by genomic PCR (see supplemental methods). GFP-wtRhoA retroviral construct was used to generate recombinant retrovirus as previously described (1,2). Low passage primary MEFs (less than passage 5) were infected with the retrovirus using 10 ug/mL of Polybrene (Chemicon Int.) and harvested 48-72 h after infection. GFP-positive cells were isolated by fluorescence-activated cell sorting (FACS). Kinase and GTPase activity assays. ROCK activity was detected with a kinase assay kit utilizing recombinant MYPT1 as a ROCK substrate (Cell Biolabs, Inc.) according to the manufacturer’s protocol. The relative levels of active RhoA, Rac1, or Cdc42 were determined by a GST pulldown assay as described previously (2). Briefly, cells were lysed in a buffer containing 1% Triton X-100 and 10 mM MgCl2, and the lysates were probed with glutathione-agarose immobilized GST-Rhotekin (Cell Biolabs, for RhoA) or GSTPAK1 (for Cdc42 or Rac1) effector domain. Bound proteins were analyzed by immunoblotting with respective antibodies. Immunoblotting and immunofluorescence. Whole-cell extracts isolated following cell lysis (20mM Tris-HCl (ph 7.6), 100 mM NaCl, 10 mM MgCl2, 1% Triton-X-100, 0.2% sodium deoxycholate, 2mM phenylmethylsulphonyl fluoride, 100nM okadaic acid and a cocktail of protease inhibitors) were resolved by SDS-PAGE and transferred to nitrocellulose membrane. Specific proteins were detected using the following antibodies: from Cell Signaling – RhoA, RhoB, RhoC, p-ERK1/2, p-PAK, p-JNK, and GFP; from BD Transduction Laboratories – Rac-1 and Cdc42; from Sigma - α-ß-γ-tubulin. For immunofluorescence, primary MEFs were seeded on two-well slides (Nalge Nunc, Int.) at a density of 2x104 cells per slide. Cells were fixed with 4% paraformaldehyde and permeabilized with 0.2% Triton X-100. Cells were stained with anti-vinculin (Sigma), -FAK, -phospho-FAK, -Paxillin and –phospho-Paxillin (BD Transduction Laboratories) and visualized using fluorescence-conjugated anti-rabbit and anti-mouse secondary antibodies (Molecular Probes). F-actin was stained using rhodamine-conjugated phalloidin (Molecular Probes), and nuclei were visualized following staining with 4,6-diamidino-2-phenylindole. Cell culture and generation of RhoA-null mouse embryonic fibroblasts (MEFs). Mice with an eyerestricted deletion of the RhoA gene were generated using the cre-loxP system where the flox allele contains two loxp sites flanked exon 3 (Figure S1). Primary MEFs were isolated from decapitated embryonic day 12.5 mouse embryos of the RhoAwt/wt and RhoA loxp/loxp genotypes by cross-breeding RhoA loxp/+ heterozygous parents. Cells were cultured in Dulbecco’s modified Eagle’s medium containing 2 mM L-Glutamine, 10% fetal bovine serum, 0.1 mM non-essential aminoacids, 55 μM ß-mercaptoethanol, and 10 ug/mL Gentamicin. To generate RhoA-null alleles, RhoA loxp/loxp MEFs were infected twice with low titer adenoviral Cre recombinase (adeno-Cre) to achieve complete removal of RhoA alleles without detectable toxicity. The genotype of the cells and effective deletion was confirmed by RhoA PCR-based protocols reaction and by Western blotting. First, to determine wt, het or loxp cells, the primer sequences are: Primer 1 (V666): 5’-TCTCTGCACTGAGGGAGTTAGG-3’ Primer 2 (V667): 5’-GTACATACAGGGAATGGAAACAAGG-3’ PCR was performed with Taq DNA polymerase (Invitrogen) with 2.5 mM MgCl2, 0.2mM dNTPs and 100 ng of primers in a final volume of 25 μL. The cycling conditions were 94ºC for 30 sec, 58ºC for 30 sec and 72ºC for one minute over 33 cycles. The predicted PCR products for wild-type allele and targeted allele are 482 bp and 633 bp, respectively. Second, to determine deletion in cre-infected samples, the primer sequences are: Primer 1 (5’out): 5’-GCACTGAGGGAGTTAGG-3’ Primer 2 (3’out): 5’-CTACACTAGCTGGGCAC-3’ The cycling conditions were 94ºC for 30 sec, 60ºC for 30 sec and 72ºC for one minute over 30 cycles. The predicted PCR product is 667bp in RhoA-deleted samples.

Real time PCR RNA was isolated from Cre or Gal adenovirus transduced RhoALOXP/LOXP or RhoAWT/WT MEF cells at different time points after replating (0, 6, 12, 72 and 96 h) and considering 3 independent samples/genotype/virus/time point, using RNeasy Micro Kit (Qiagen, Valencia, CA) and recommended protocol. First-strand complementary DNA synthesis was performed using High Capacity cDNA Reverse Transcription Kit (Applied Biosystems,CA) from RNA sample. Real-time quantitative PCR was carried out in an ABI Prism 7900 Sequence Detector by using SYBR Green PCR Master Mix reagent (Applied Biosystems, CA). Relative expression was calculated by using the delta ct method (ABI user Bulletin 2), and GAPDH was used as internal control. Data are representative of two independent experiments performed in triplicate. Primer information: p16: 5'- TCA ACT ACG GTG CAG ATT CG -3'(forward) and 5'- TCG CAC GAT GTC TTG ATG TC -3'(reverse) p21: 5'- GTA CTT CCT CTG CCC TGC TG -3'(forward) and 5'- TCT GCG CTT GGA GTG ATA GA -3'(reverse) p27: 5'- AGA ACT AAC CCG GGA CTT GG -3'(forward) and 5'- CGG GGG CCT GTA GTA GAA CT 3'(reverse) GAPDH: 5'- TGA GGA CCA GGT TGT CTC CT -3’(forward) and 5'- CCC TGT TGC TGT AGC CGT AT 3'(reverse) Cell proliferation assay. Cell proliferation was determined by counting the number of cell in triplicate daily during the cell growth period. To determine the cell cycle profiles, MEFs were serum-starved for 48 h and then stimulated with 10% FBS. At different time points, the cells were subjected to PI/RNase staining followed by FACS analysis. Cell apoptosis was determined by 7AAD. RhoB gene silencing and C3 toxin inhibition. RhoB gene silencing was achieved by transient transfection of On-TARGETplus SMART pool siRNA (L-064118-00-0005 mouse RhoB NM-007 483). On-TARGETplus Non-targeting pool siRNA (D-001810-10-05) was used as a control. Rho protein inhibition was achieved by treatment with 2 μg/mL C3 toxin (Cytoskeleton Inc, CO. USA) for 2 or 4 hours following 48 hour serum starvation. Senescence-associated ß-Galactosidase activity assay Senescence-associated ß-Galactosidase activity of the cells was detected as described (3,4). The percentage of positively stained cells was quantified using a phase-contrast microscope. DNA constructs Retroviral constructs expressing RhoA-GFP wt was generated by ligating the corresponding cDNA fragments into the BamH1 and EcoRI sites in frame with the nucleotides encoding a three-hemaglutinin (HA)3 tag at the 5’ end of the retroviral vector MIEG3 that expresses enhanced green fluorescent protein (EGFP) bicistronically. Luciferase reporter assay NF-kB- or SRF-luciferase and ß-galactosidase plasmids were transfected using FuGENE 6 transfection reagent (Roche). 24 hours post-transfection, serum was removed from all plates for 24 hours. Following serum starvation, cells were stimulated with DMEM with 10%FBS for 8h prior to harvest. Following cell lysis, luciferase activity was quantified following introduction of luciferin substrate (Promega, Madison, WI). ßgalactosidase activity was determined using GalactoStar reagents (ABI, Foster City, CA) to account for differences in transfection efficiency. Luciferase activity was plotted relative to unstimulated controls. Cell apoptosis analysis The apoptotic cells were measured by 7AAD staining followed by FACS analysis. In other studies, apoptosis was evaluated by TUNEL using a commercial kit (Roche) or DNA laddering according to Melendez et al (5).

Supplemental Figure Legends S1. Gene targeting strategy for generating RhoA conditional knockout mice. S2. Effect of the C3-Rho inhibitor on WT or RhoA-deficient MEF cells. RhoA-deficient and control WT cells were plated and after 48h of culture were serum starved for 24h. Then, cells were treated with C3-RhoA inhibitor (2ug/mL) for 4h in the absence of serum. Serum stimulation (DMEM supplemented with 20% FBS) after C3 treatment was extended for 15 min. Cells were fixed and actin network revealed with RhodaminPhalloidin. C3, C3-toxin. S3. Effects of rhoA deletion on gene transcription. RhoA deletion does not affect gene transcription activity of Stat3, SRF, and NF-κB. Cells were seeded at 60-70% confluency. NF-kB-, SRF- or Stat-3-luciferase were transfected using FuGENE 6.and ß-galactosidase reporter plasmid was used as internal control. Following 24h starvation after transfection, cells were stimulated 10% FBS (serum) for 8h.. S4. Evaluation of MPM-2 staining in RhoA-deficient MEF cells. Mitosis was estimated using a MPM-2 antibody and DAPI in control and RhoA KO cells between 24-96h in culture. The MPM-2 positive cells were quantified under a microscope. S5. BrdU incorporation in RhoA KO MEF cells. Cells were incubated with 100 μM BrdU for 2 hr before collecting and evaluated by FACS analysis. S6. Deletion of RhoA does not induce apoptosis or senescence, nor change p16, p21, or p27 expression pattern, in RhoA-deficient cells. Senescence was estimated by ß-Gal staining and expression of p16 level and apoptosis by TUNEL and DNA laddering. ). Samples for DNA laddering were collected after 96h in culture. 20μg/lane was loaded. ST: Standard DNA marker. Staurosporine (100μM for 6h in serum-free media) was used as a positive control for apoptosis. ß-Gal positive cells were counted in triplicates in three independent experiments to quantify senescent cells. Western blots were performed using the indicated cell lypstes to probe for the tumor suppressor expression. S7. Defective Lamin-B staining in RhoA-deficient cells. Plated cells (72h) were fixed and stained for LaminB (green). Cells were co-stained for actin (red) and DNA (blue). Arrows indicate dividing cell nucleus. S8. α- and ß-tubulin staining in RhoA KO MEF cells. Tubulin network was visualized using an α-/ß-tubulin antibody and co-stained with DAPI. S9. Examination of RhoA and RhoC knockout MEFs. Protein profile in RhoA/RhoC double KO cells. Double KO cells were obtained as described in the method. Cell samples were processed for WB. S10. Cell proliferation of RhoA/RhoC-deficient MEF cells. 1 x 105 cells/well were plated and proliferation by counting cells in triplicate between 24-96h. Cell viability was estimated by Trypan-Blue staining. Error bars represent SD

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Cell Biology: RhoA GTPase Is Dispensable for Actomyosin Regulation but Is Essential for Mitosis in Primary Mouse Embryonic Fibroblasts Jaime Melendez, Kristy Stengel, Xuan Zhou, Bharesh K. Chauhan, Marcella Debidda, Paul Andreassen, Richard A. Lang and Yi Zheng J. Biol. Chem. 2011, 286:15132-15137. doi: 10.1074/jbc.C111.229336 originally published online March 14, 2011

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